Publications

2009

D. Danino, E. Kesselman, G. Saper, H. I. Petrache, and D. Harries. Osmotically-induced reversible transitions in lipid-DNA mesophases. Biophys. J., in press.

2008

T. K. Rostovtseva, H. I. Petrache, N. Kazemi, E. Hassanzadeh, and S. M. Bezrukov. Interfacial Polar Interactions Affect Gramicidin Channel Kinetics. Biophys. J.94, L23-25, 2008. [pdf]

2007

H. I. Petrache, D. Harries, and V. A. Parsegian. Measurement of Lipid forces by X-ray Diffraction and Osmotic Stress. In Methods in Membrane Lipids, A. Dopico (ed.), Humana, 2007. [pdf]

H. I. Petrache and M. F. Brown. X-ray Scattering and Solid-State 2H NMR Probes of Structural Fluctuations in Lipid Membranes. In Methods in Membrane Lipids, A. Dopico (ed.), Humana, 2007. [pdf]

I. Petrache, I. Fijalkowska, T. R. Medler, J. Skirball, P. Cruz, L. Zhen, H. I. Petrache, T. R. Flotte, and R. M. Tuder. alpha-1 Antitrypsin Inhibits Caspase-3 Activity, Preventing Lung Endothelial Cell Apoptosis. Am. J. Path. 2006, 169:1155-1166. [pdf]

H. I. Petrache, S. Tristram-Nagle, D. Harries, N. Kucerka, J. F. Nagle, and V. A. Parsegian. Swelling of Phospholipids by Monovalent Salt. J. Lipid Res. 2006, 47:302-309. [pdf]

M. C. Gondre-Lewis, H. I. Petrache, C. A. Wassif, D. Harries, A. Parsegian, F. D. Porter, and Y. P. Loh. Abnormal Sterols in Cholesterol-Deficiency Diseases Cause Secretory Granule Malformation and Decreased Membrane Curvature. J. Cell Science, 2006, 119:1876-1885. [pdf]

H. I. Petrache, T. Zemb, L. Belloni, and V. Ad. Parsegian. Salt Screening and Specific Ion Adsorption Determine Neutral-Lipid Membrane Interactions. Proc. Natl. Acad. Sci., 2006, 103:7982-7987. [pdf]

2005

H. I. Petrache, I. Kimchi, D. Harries, and V. A. Parsegian. Measured Depletion of Ions at the Biomembrane Interface. J. Am. Chem. Soc., 2005, 127:11546-11547. [pdf]

K. Rajamoorthi, H. I. Petrache, T. J. McIntosh, and M. F. Brown. Packing and Viscoelasticity of Polyunsaturated omega-3 and omega-6 Lipid Bilayers as seen by ²H NMR and X-ray Diffraction. J. Am. Chem. Soc., 2005, 127:1576-1588. [pdf]

N. Kucerka, Y. Liu, N. Chu, H. I. Petrache, S. Tristram-Nagle, and J. F. Nagle. Structure of Fully Hydrated Fluid Phase DMPC and DLPC Lipid Bilayers Using X-Ray Scattering from Oriented Multilamellar Arrays and from Unilamellar Vesicles. Biophys. J. 2005, 88:2626-2637. [pdf]

H. I. Petrache , D. Harries, and V. A. Parsegian. Alteration of Lipid Membrane Rigidity by Cholesterol and Its Metabolic Precursors. Macromol. Symp., 2005, 219:39-50. [pdf]

H. Nanda, J. N. Sachs, H. I. Petrache, and T. B. Woolf. Environmental Effects on Glycophorin A Folding and Structure Examined through Molecular Simulations. J. Chem. Theory Comput., 2005, 1:375-388. [pdf]

2004

J. N. Sachs, H. Nanda, H. I. Petrache, and T. B. Woolf. Changes in Phosphatidylcholine Headgroup Tilt and Water Order Induced by Monovalent Salts: Molecular Dynamics Simulations. Biophys. J. 2004, 86:3772-3782. [pdf]

H. I. Petrache, S. Tristram-Nagle, K. Gawrisch, D. Harries, V. A. Parsegian, and J. F. Nagle. Structure and Fluctuations of Charged Phophatidylserine Bilayers in the Absence of Salt. Biophys. J. 2004, 86:1574-1586. [pdf]

2003

J. N. Sachs, H. I. Petrache, and T. B. Woolf. Interpretation of Small Angle X-ray Measurements Guided by Molecular Dynamics Simulations of Lipid Bilayers. Chem. Phys. Lipids. 2003, 126:211-223. [pdf]

J. N. Sachs, H. I. Petrache, D. M. Zuckerman, and T. B. Woolf. Molecular Dynamics Simulations of Ionic Concentration Gradients Across Model Bilayers. J. Chem. Phys. 2003, 118:1957-1969. [pdf]

2002

H. I. Petrache, D. M. Zuckerman, J. N. Sachs, J. A. Killian, R. E. Koeppe II, and T. B. Woolf. Hydrophobic Matching Mechanism Investigated by Molecular Dynamics Simulations. Langmuir 2002, 18:1340-1351. [pdf]

2001

H. I. Petrache, A. Salmon, and M. F. Brown. Structural Properties of Docosahexaenoyl Phospholipid Bilayers Investigated by Solid-state ²H NMR Spectroscopy. J. Am. Chem. Soc. 2001, 123:12611-12622. [pdf]

2000

H. I. Petrache, A. Grossfield, K. R. MacKenzie, D. M. Engelman, and T. B. Woolf. Modulation of Glycophorin A Transmembrane Helix Interactions by Lipid Bilayers: Molecular Dynamics Calculations. J. Mol. Biol. 2000, 302:727-746. [pdf]

H. I. Petrache, S. W. Dodd, and M. F. Brown. Area per Lipid and Acyl Length Distributions in Fluid Phosphatidylcholines Determined by ²H NMR Spectroscopy. Biophys. J. 2000, 79:3172-3192. [pdf]

1999

H.I. Petrache, K. Tu, and J. F. Nagle. Analysis of Simulated NMR Order Parameters for Lipid Bilayer Structure Determination. Biophys. J. 1999, 76:2479-2487. [pdf]

1998

H. I. Petrache, Structure and Interactions of Fluid Phospholipid Bilayers Measured by High Resolution X-ray Scattering, Ph.D. Thesis, Carnegie Mellon University, 1998. [pdf]

J. F. Nagle, H. I. Petrache, N. Gouliaev, S. Tristram-Nagle, Y. Liu, R. M. Suter, and K. Gawrisch. Multiple Mechanisms for Critical Behavior in the Biologically Relevant Phase of Lecithin Bilayers. Phys. Rev. E 1998, 58:7769-7776. [pdf]

H. I. Petrache, S. Tristram-Nagle, and J. F. Nagle. Fluid Phase Structure of EPC and DMPC Bilayers. Chem. Phys. Lipids. 1998, 95:83-94. [pdf]

S. Tristram-Nagle, H. I. Petrache, and J. F. Nagle. Structure and Interactions of Fully Hydrated Dioleoylphosphatidylcholine Bilayers. Biophys. J. 1998, 75:917-925. [pdf]

H. I. Petrache, N. Gouliaev, S. Tristram-Nagle, R. Zhang, R. M. Suter, and J. F. Nagle. Interbilayer Interactions from High Resolution X-Ray Scattering. Phys. Rev. E 1998, 57:7014-7024. [pdf]

S. Tristram-Nagle, T. Moore, H. I. Petrache, and J. F. Nagle. DMSO Produces a New Subgel Phase in DPPC: DSC and X-Ray Diffraction Study. Biochim. Biophys. Acta 1998, 1369:19-33. [pdf]

S. Tristram-Nagle, H. I. Petrache, R. M. Suter, and J. F. Nagle. Effect of Substrate Roughness on D Spacing Supports Theoretical Resolution of Vapor Pressure Paradox. Biophys. J. 1998, 74:1421-1427. [pdf]

1997

H. I. Petrache, S. E. Feller, and J. F. Nagle. Determination of Component Volumes of Lipid Bilayers from Simulations. Biophys. J. 1997, 72:2237-2242. [pdf]

1996

J. F. Nagle, R. Zhang, S. Tristram-Nagle, W. Sun, H. I. Petrache, and R. M. Suter. X-Ray Structure Determination of Fully Hydrated L-alpha Phase Dipalmitoylphosphatidylcholine Bilayers. Biophys. J. 1996, 70:1419-1431. [pdf]

1994

G. Anzivino, F. Arzarello, G. Bari, M. Basile, L. Bellagamba, D. Boscherini, G. Bruni, P. Bruni, G. Cara Romeo, M. Chiarini, L. Cifarelli, F. Cindolo, F. Ciralli, A. Contin, M. Dardo, S. D'Auria, C. Del Papa, S. De Pasquale, F. Frasconi, P. Giusti, G. Iacobucci, G. Maccarrone, A. Margotti, T. Massam, R. Nania, H. I. Petrache, S. Qian, G. Sartorelli, Y. M. Shabelski, M. A. Stepanov, O. P. Strogova, R. Timellini, L. Votano, and A. Zichichi. Intrinsic Charm in pp and yp Interactions. Nuovo Cimento A (Italy) 1994, 107A:955-988.